totalReadCounts {leeBamViews}R Documentation

scan BAM files for total read counts

Description

scan BAM files for total read counts

Usage

totalReadCounts(x)

Arguments

x

BamViews-class instance

Details

slow procedure – does lightweight scan of entire file

Value

named integer vector of read counts per sample

Author(s)

VJ Carey <stvjc@channing.harvard.edu>

Examples

example(bs1)
totalReadCounts(bs1)

[Package leeBamViews version 0.99.13 Index]